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Potential bug?

Tuesday, 13 December 2022 · 4 messages · last reply 15 Dec 2022

Philippe Pons13 Dec 2022 11:03 #

Hi all, I tried to replace a database in the BaseX Database Administration (dba). A simple task that I often do. But this time, I get this message: Unexpected error: Improper use? Potential bug? Your feedback is welcome: Contact:basex-talk at mailman.uni-konstanz.de Version: BaseX 9.2.1 Java: Oracle Corporation, 1.8.0_231 OS: Linux, amd64 Stack Trace:

java.lang.ArrayIndexOutOfBoundsException: 1
	at org.basex.io.random.TableDiskAccess.fpre(TableDiskAccess.java:507)
	at org.basex.io.random.TableDiskAccess.cursor(TableDiskAccess.java:468)
	at org.basex.io.random.TableDiskAccess.read1(TableDiskAccess.java:156)
	at org.basex.data.Data.kind(Data.java:304)
	at org.basex.query.value.node.DBNode.<init>(DBNode.java:50)
	at org.basex.query.value.seq.DBNodeSeq.get(DBNodeSeq.java:139)
	at org.basex.query.value.seq.DBNodeSeq.get(DBNodeSeq.java:164)
	at org.basex.query.func.db.DbOpen.value(DbOpen.java:19)
	at org.basex.query.func.StandardFunc.optimize(StandardFunc.java:82)
	at org.basex.query.expr.Arr.compile(Arr.java:43)
	at org.basex.query.expr.path.Path.compile(Path.java:129)
	at org.basex.query.expr.If.compile(If.java:58)
	at org.basex.query.func.StaticFunc.comp(StaticFunc.java:69)
	at org.basex.query.QueryCompiler.compile(QueryCompiler.java:114)
	at org.basex.query.QueryCompiler.compile(QueryCompiler.java:105)
	at org.basex.query.QueryContext.compile(QueryContext.java:312)
	at org.basex.query.QueryContext.iter(QueryContext.java:331)
	at org.basex.http.restxq.RestXqResponse.serialize(RestXqResponse.java:73)
	at org.basex.http.web.WebResponse.create(WebResponse.java:56)
	at org.basex.http.restxq.RestXqServlet.run(RestXqServlet.java:54)
	at org.basex.http.BaseXServlet.service(BaseXServlet.java:62)
	at javax.servlet.http.HttpServlet.service(HttpServlet.java:790)
	at org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:865)
	at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:542)
	at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:146)
	at org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548)
	at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
	at org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:257)
	at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1700)
	at org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:255)
	at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1345)
	at org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:203)
	at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:480)
	at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1667)
	at org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:201)
	at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1247)
	at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:144)
	at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
	at org.eclipse.jetty.server.Server.handle(Server.java:505)
	at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:370)
	at org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:267)
	at org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:305)
	at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:103)
	at org.eclipse.jetty.io.ChannelEndPoint$2.run(ChannelEndPoint.java:117)
	at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.runTask(EatWhatYouKill.java:333)
	at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:310)
	at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.tryProduce(EatWhatYouKill.java:168)
	at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKill.java:126)
	at org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:366)
	at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:786)
	at org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:743)
	at java.lang.Thread.run(Thread.java:748)

Could you help me to find a solution? Many thanks, Philippe

Christian Grün13 Dec 2022 17:42 #

Hi Philippe, I remember we’ve fixed a bug like this 2, 3 years ago. BaseX 9.2.1 is pretty old now; do you have a chance to upgrade to BaseX 10.4 or at least BaseX 9.6.4? I guess the problem should disappear if you run OPTIMIZE ALL or db:optimize(..., true()) and switch to the new version. Hope this helps, cordiales salutations, Christian

Quoted text · Philippe Pons · 75 lines

On Tue, Dec 13, 2022 at 11:04 AM Philippe Pons <philippe.pons at college-de-france.fr> wrote: > > Hi all, > > I tried to replace a database in the BaseX Database Administration (dba). A simple task that I often do. > But this time, I get this message: > > > Unexpected error: Improper use? Potential bug? Your feedback is welcome: > Contact: basex-talk at mailman.uni-konstanz.de > Version: BaseX 9.2.1 > Java: Oracle Corporation, 1.8.0_231 > OS: Linux, amd64 > Stack Trace: > java.lang.ArrayIndexOutOfBoundsException: 1 > at org.basex.io.random.TableDiskAccess.fpre(TableDiskAccess.java:507) > at org.basex.io.random.TableDiskAccess.cursor(TableDiskAccess.java:468) > at org.basex.io.random.TableDiskAccess.read1(TableDiskAccess.java:156) > at org.basex.data.Data.kind(Data.java:304) > at org.basex.query.value.node.DBNode.<init>(DBNode.java:50) > at org.basex.query.value.seq.DBNodeSeq.get(DBNodeSeq.java:139) > at org.basex.query.value.seq.DBNodeSeq.get(DBNodeSeq.java:164) > at org.basex.query.func.db.DbOpen.value(DbOpen.java:19) > at org.basex.query.func.StandardFunc.optimize(StandardFunc.java:82) > at org.basex.query.expr.Arr.compile(Arr.java:43) > at org.basex.query.expr.path.Path.compile(Path.java:129) > at org.basex.query.expr.If.compile(If.java:58) > at org.basex.query.func.StaticFunc.comp(StaticFunc.java:69) > at org.basex.query.QueryCompiler.compile(QueryCompiler.java:114) > at org.basex.query.QueryCompiler.compile(QueryCompiler.java:105) > at org.basex.query.QueryContext.compile(QueryContext.java:312) > at org.basex.query.QueryContext.iter(QueryContext.java:331) > at org.basex.http.restxq.RestXqResponse.serialize(RestXqResponse.java:73) > at org.basex.http.web.WebResponse.create(WebResponse.java:56) > at org.basex.http.restxq.RestXqServlet.run(RestXqServlet.java:54) > at org.basex.http.BaseXServlet.service(BaseXServlet.java:62) > at javax.servlet.http.HttpServlet.service(HttpServlet.java:790) > at org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:865) > at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:542) > at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:146) > at org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548) > at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132) > at org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:257) > at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1700) > at org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:255) > at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1345) > at org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:203) > at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:480) > at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1667) > at org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:201) > at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1247) > at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:144) > at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132) > at org.eclipse.jetty.server.Server.handle(Server.java:505) > at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:370) > at org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:267) > at org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:305) > at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:103) > at org.eclipse.jetty.io.ChannelEndPoint$2.run(ChannelEndPoint.java:117) > at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.runTask(EatWhatYouKill.java:333) > at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:310) > at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.tryProduce(EatWhatYouKill.java:168) > at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKill.java:126) > at org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:366) > at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:786) > at org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:743) > at java.lang.Thread.run(Thread.java:748) > > > > Could you help me to find a solution? > > Many thanks, > Philippe

Philippe Pons15 Dec 2022 11:00 #

Hi Christian, Thank you very much. The function helped me to find the solution to my problem, and to solve it Now I'll look into upgrading to the new version. Best regards, Philippe

Quoted text · Christian Grün · 88 lines

Le 13/12/2022 à 17:42, Christian Grün a écrit : > Hi Philippe, > > I remember we’ve fixed a bug like this 2, 3 years ago. BaseX 9.2.1 is > pretty old now; do you have a chance to upgrade to BaseX 10.4 or at > least BaseX 9.6.4? > > I guess the problem should disappear if you run OPTIMIZE ALL or > db:optimize(..., true()) and switch to the new version. > > Hope this helps, cordiales salutations, > Christian > > > On Tue, Dec 13, 2022 at 11:04 AM Philippe Pons > <philippe.pons at college-de-france.fr> wrote: >> Hi all, >> >> I tried to replace a database in the BaseX Database Administration (dba). A simple task that I often do. >> But this time, I get this message: >> >> >> Unexpected error: Improper use? Potential bug? Your feedback is welcome: >> Contact:basex-talk at mailman.uni-konstanz.de >> Version: BaseX 9.2.1 >> Java: Oracle Corporation, 1.8.0_231 >> OS: Linux, amd64 >> Stack Trace: >> java.lang.ArrayIndexOutOfBoundsException: 1 >> at org.basex.io.random.TableDiskAccess.fpre(TableDiskAccess.java:507) >> at org.basex.io.random.TableDiskAccess.cursor(TableDiskAccess.java:468) >> at org.basex.io.random.TableDiskAccess.read1(TableDiskAccess.java:156) >> at org.basex.data.Data.kind(Data.java:304) >> at org.basex.query.value.node.DBNode.<init>(DBNode.java:50) >> at org.basex.query.value.seq.DBNodeSeq.get(DBNodeSeq.java:139) >> at org.basex.query.value.seq.DBNodeSeq.get(DBNodeSeq.java:164) >> at org.basex.query.func.db.DbOpen.value(DbOpen.java:19) >> at org.basex.query.func.StandardFunc.optimize(StandardFunc.java:82) >> at org.basex.query.expr.Arr.compile(Arr.java:43) >> at org.basex.query.expr.path.Path.compile(Path.java:129) >> at org.basex.query.expr.If.compile(If.java:58) >> at org.basex.query.func.StaticFunc.comp(StaticFunc.java:69) >> at org.basex.query.QueryCompiler.compile(QueryCompiler.java:114) >> at org.basex.query.QueryCompiler.compile(QueryCompiler.java:105) >> at org.basex.query.QueryContext.compile(QueryContext.java:312) >> at org.basex.query.QueryContext.iter(QueryContext.java:331) >> at org.basex.http.restxq.RestXqResponse.serialize(RestXqResponse.java:73) >> at org.basex.http.web.WebResponse.create(WebResponse.java:56) >> at org.basex.http.restxq.RestXqServlet.run(RestXqServlet.java:54) >> at org.basex.http.BaseXServlet.service(BaseXServlet.java:62) >> at javax.servlet.http.HttpServlet.service(HttpServlet.java:790) >> at org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:865) >> at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:542) >> at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:146) >> at org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548) >> at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132) >> at org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:257) >> at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1700) >> at org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:255) >> at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1345) >> at org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:203) >> at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:480) >> at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1667) >> at org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:201) >> at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1247) >> at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:144) >> at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132) >> at org.eclipse.jetty.server.Server.handle(Server.java:505) >> at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:370) >> at org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:267) >> at org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:305) >> at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:103) >> at org.eclipse.jetty.io.ChannelEndPoint$2.run(ChannelEndPoint.java:117) >> at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.runTask(EatWhatYouKill.java:333) >> at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:310) >> at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.tryProduce(EatWhatYouKill.java:168) >> at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKill.java:126) >> at org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:366) >> at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:786) >> at org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:743) >> at java.lang.Thread.run(Thread.java:748) >> >> >> >> Could you help me to find a solution? >> >> Many thanks, >> Philippe

Maximilian Gärberin reply to Christian Grün, 13 Dec 2022, 17:4215 Dec 2022 12:53 #

Basex: has so few bugs that Christian remembers every single one ;) Christian Grün <christian.gruen at gmail.com> schrieb am Di., 13. Dez. 2022, 17:42:

Quoted text · Christian Grün · 115 lines

> Hi Philippe, > > I remember we’ve fixed a bug like this 2, 3 years ago. BaseX 9.2.1 is > pretty old now; do you have a chance to upgrade to BaseX 10.4 or at > least BaseX 9.6.4? > > I guess the problem should disappear if you run OPTIMIZE ALL or > db:optimize(..., true()) and switch to the new version. > > Hope this helps, cordiales salutations, > Christian > > > On Tue, Dec 13, 2022 at 11:04 AM Philippe Pons > <philippe.pons at college-de-france.fr> wrote: > > > > Hi all, > > > > I tried to replace a database in the BaseX Database Administration > (dba). A simple task that I often do. > > But this time, I get this message: > > > > > > Unexpected error: Improper use? Potential bug? Your feedback is welcome: > > Contact: basex-talk at mailman.uni-konstanz.de > > Version: BaseX 9.2.1 > > Java: Oracle Corporation, 1.8.0_231 > > OS: Linux, amd64 > > Stack Trace: > > java.lang.ArrayIndexOutOfBoundsException: 1 > > at org.basex.io.random.TableDiskAccess.fpre(TableDiskAccess.java:507) > > at org.basex.io.random.TableDiskAccess.cursor(TableDiskAccess.java:468) > > at org.basex.io.random.TableDiskAccess.read1(TableDiskAccess.java:156) > > at org.basex.data.Data.kind(Data.java:304) > > at org.basex.query.value.node.DBNode.<init>(DBNode.java:50) > > at org.basex.query.value.seq.DBNodeSeq.get(DBNodeSeq.java:139) > > at org.basex.query.value.seq.DBNodeSeq.get(DBNodeSeq.java:164) > > at org.basex.query.func.db.DbOpen.value(DbOpen.java:19) > > at org.basex.query.func.StandardFunc.optimize(StandardFunc.java:82) > > at org.basex.query.expr.Arr.compile(Arr.java:43) > > at org.basex.query.expr.path.Path.compile(Path.java:129) > > at org.basex.query.expr.If.compile(If.java:58) > > at org.basex.query.func.StaticFunc.comp(StaticFunc.java:69) > > at org.basex.query.QueryCompiler.compile(QueryCompiler.java:114) > > at org.basex.query.QueryCompiler.compile(QueryCompiler.java:105) > > at org.basex.query.QueryContext.compile(QueryContext.java:312) > > at org.basex.query.QueryContext.iter(QueryContext.java:331) > > at org.basex.http.restxq.RestXqResponse.serialize(RestXqResponse.java:73) > > at org.basex.http.web.WebResponse.create(WebResponse.java:56) > > at org.basex.http.restxq.RestXqServlet.run(RestXqServlet.java:54) > > at org.basex.http.BaseXServlet.service(BaseXServlet.java:62) > > at javax.servlet.http.HttpServlet.service(HttpServlet.java:790) > > at org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:865) > > at > org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:542) > > at > org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:146) > > at > org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548) > > at > org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132) > > at > org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:257) > > at > org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1700) > > at > org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:255) > > at > org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1345) > > at > org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:203) > > at > org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:480) > > at > org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1667) > > at > org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:201) > > at > org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1247) > > at > org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:144) > > at > org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132) > > at org.eclipse.jetty.server.Server.handle(Server.java:505) > > at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:370) > > at > org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:267) > > at org.eclipse.jetty.io > .AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:305) > > at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:103) > > at org.eclipse.jetty.io.ChannelEndPoint$2.run(ChannelEndPoint.java:117) > > at > org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.runTask(EatWhatYouKill.java:333) > > at > org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:310) > > at > org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.tryProduce(EatWhatYouKill.java:168) > > at > org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKill.java:126) > > at > org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:366) > > at > org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:786) > > at > org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:743) > > at java.lang.Thread.run(Thread.java:748) > > > > > > > > Could you help me to find a solution? > > > > Many thanks, > > Philippe > >

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