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* Initial values for global options can also be specified via system properties, which can e.g. be passed on with the [httphttps://docs.oracle.com/javaseen/1.4.2java/docsjavase/tooldocs11/windowstools/java.html#options -D flag] on command line, or using [httphttps://docs.oracle.com/en/java/javase/611/docs/api/java.base/java/lang/System.html#setProperty(java.lang.String,%20javajava.lang.String) System.setProperty()] before creating a BaseX instance. The specified keys need to be prefixed with {{Code|org.basex.}}. An example:
<syntaxhighlight lang="perl">
|-
| '''Summary'''
|Many XML documents include whitespaces that have been added to improve readability. This option controls the [httphttps://www.w3.org/TR/REC-xml/#sec-white-space white-space processing mode] of the XML parser:
* With the default value {{Code|true}}, leading and trailing whitespaces from text nodes will be chopped and all empty text nodes will be discarded.
* The flag should be turned off if a document contains [[Full-Text#Mixed Content|mixed content]].
* Commas in values must be duplicated.
* Variables may optionally be introduced with a leading dollar sign.
* If a variable uses a namespace different to the default namespace, it can be specified with the [http://www.jclark.com/xml/xmlns.htm Clark Notation] or [httphttps://www.w3.org/TR/xquery-30/#id-basics Expanded QName Notation].
This option can also be used on [[Command-Line Options#BaseX Standalone|command line]] with the flag <code>-b</code>.
|-
|-
| '''Summary'''
|Specifies how many stack frames of [httphttps://en.wikipedia.org/wiki/Tail_call tail-calls] are allowed on the stack at any time. When this limit is reached, tail-call optimization takes place and some call frames are eliminated. The feature can be turned off by setting the value to {{Code|-1}}.
|}
